Example data to test in Angicart is available in the example directory on GitHub. Both the large PNG files (
dicom_1,
dicom_2,
dicom_3) and downsampled PNG files (
dicom_small_1,
dicom_small_2,
dicom_small_3) are available. For full instructions on reproducing the analysis that is presented in Newberry et al. (2015), see the reproducing the analysis page.
Examples of the skeletonization and segmentation from input images are shown below
 | → |  |  |
| Input images | Skeletonization | Segmentation |
An example output file formatted with tab-separated values can be converted into the desired format, offering easy access to the data for individual segments, as shown below.
Output files to verify your analysis are available to download as a zipped directory: dicom_small_out.zip. This download includes all point lists, graphs, skeletons, segmenations, and collated descriptions for viewing within Angicart and exporting to other programs.
[More comprehensive data search…]